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| Paper | Published | Area | Tags | Intel | Citations |
|---|---|---|---|---|---|
Search and browse arXiv CS/AI/ML papers, enriched with AI-generated insights.
Generate novel research ideas grounded in real arXiv papers with Brainstorm.
| Paper | Published | Area | Tags | Intel | Citations |
|---|---|---|---|---|---|
Search and browse arXiv CS/AI/ML papers, enriched with AI-generated insights.
Generate novel research ideas grounded in real arXiv papers with Brainstorm.
| Paper | Published | Area | Tags | Intel | Citations |
|---|---|---|---|---|---|
Showing 1-21 of 21 papers (page 1 of 1)路 85 ms
| Paper | Published | Area | Tags | Intel | Citations |
|---|---|---|---|---|---|
| Unlocking the Regulatory Genome by ARGUS: An Evidence-Constrained Agentic Framework for Interpreting Single Nucleotide Variants Matthew B. Obusan, Max Chao, Nimisha Papineni, Pratik Dutta Published: 2026-10-08Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-10-08 | q-bio.GN | ai-safety, preprint, q-biogn | E12 / R9 (94%) | - |
| CellMSA: Context Modeling for Single-Cell Representation Learning Minghao Liu, Suyuan Zhao, Yizhen Luo, Zaiqing Nie Published: 2026-09-30Area: q-bio.GNCitations: 35 Tags: ai-safety, preprint, q-biogn | 2026-09-30 | q-bio.GN | ai-safety, preprint, q-biogn | E12 / R8 (91%) | 35 |
| Large Language Model Agents for Evidence Based Genetic Disease Severity Classification Ahmadreza Argha, Hamid Alinejad-Rokny, John Wang, Mahmoud Aarabi Published: 2026-09-17Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-09-17 | q-bio.GN | ai-safety, preprint, q-biogn | E8 / R7 (95%) | - |
| Large Language Model Agents for Evidence Based Genetic Disease Severity Classification Ahmadreza Argha, Hamid Alinejad-Rokny, John Wang, Mahmoud Aarabi Published: 2026-09-17Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-09-17 | q-bio.GN | ai-safety, preprint, q-biogn | E8 / R7 (95%) | - |
| Structure is not mechanism: high-gain gated-FFN rows across text and genomic foundation models Alexandros Tzanakakis, Aris Karatzikos, Ilias Georgakopoulos-Soares Published: 2026-09-13Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-09-13 | q-bio.GN | ai-safety, preprint, q-biogn | E10 / R7 (93%) | - |
| Human mutation field reveals an equilibrium-like structure with irreversible circulation Amos Maritan, Daniel Maria Busiello, Isabella Caranzano, Piero Fariselli Published: 2026-09-07Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-09-07 | q-bio.GN | ai-safety, preprint, q-biogn | E7 / R8 (91%) | - |
| Subcellularly Resolved Single-Cell Embedding Learning with Transcriptomic data, Protein Structure and Localization Information Hong-Bin Shen, Jiachen Li, Xiaoyong Pan, Yuan Liu Published: 2026-09-02Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-09-02 | q-bio.GN | ai-safety, preprint, q-biogn | E8 / R7 (91%) | - |
| PopPert: Population-level Joint-Distribution Modeling for Single-Cell Perturbation Prediction Baisheng Lai, Handong Wang, Haochen Feng, Jiaxin Qi Published: 2026-09-01Area: q-bio.GNCitations: 15 Tags: ai-safety, preprint, q-biogn | 2026-09-01 | q-bio.GN | ai-safety, preprint, q-biogn | E14 / R11 (91%) | 15 |
| Static analysis-guided agentic AI translation enables Rust as a full stack bioinformatics language Johan Henriksson Published: 2026-08-13Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-08-13 | q-bio.GN | ai-safety, preprint, q-biogn | E14 / R9 (88%) | - |
| Improving scDiffusion with Sparsity-Biased Classifier-Free Guidance Hao Sun, Ikuko Nishikawa, Yen-Wei Chen, Yu Song Published: 2026-07-31Area: q-bio.GNCitations: 30 Tags: ai-safety, preprint, q-biogn | 2026-07-31 | q-bio.GN | ai-safety, preprint, q-biogn | E8 / R6 (92%) | 30 |
| LLMBDC: Language Model for Biological Domains Oriented Clustering of Gene Ontology Jiaying Lu, Jie Xu, Peng Jin, Ximing Ran Published: 2026-07-30Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-07-30 | q-bio.GN | ai-safety, preprint, q-biogn | E11 / R10 (91%) | - |
| Foundation-model-guided radiogenomic discovery linking cancer genomes to cancer scans Christiane Kuhl, Daniel Truhn, Frederik Hauke, Ingo Kurth Published: 2026-07-22Area: q-bio.GNCitations: 24 Tags: ai-safety, preprint, q-biogn | 2026-07-22 | q-bio.GN | ai-safety, preprint, q-biogn | E10 / R7 (90%) | 24 |
| Causal dictionary learning reveals and validates transcription-factor binding features in genomic language models Sarwan Ali Published: 2026-07-21Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-07-21 | q-bio.GN | ai-safety, preprint, q-biogn | E10 / R7 (93%) | - |
| Making Single-Cell Data Distillation Auditable: Traceable Real-Cell Coresets via Discrete Min-Max Selection Bowen Han, Lingbei Mengg, Peize He, Yaodi Luo Published: 2026-07-20Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-07-20 | q-bio.GN | ai-safety, preprint, q-biogn | E10 / R7 (92%) | - |
| GenoBERT: A Language Model for Accurate Genotype Imputation Anqi Liu, Chaoyang Zhang, Chen Zhao, Chuan Qiu Published: 2026-03-31Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-03-31 | q-bio.GN | ai-safety, preprint, q-biogn | E5 / R3 (96%) | - |
| SynLeaF: A Dual-Stage Multimodal Fusion Framework for Synthetic Lethality Prediction Across Pan- and Single-Cancer Contexts Jiahao Ma, Junyi Li, Rui Han, Ruinan Wang Published: 2026-03-23Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-03-23 | q-bio.GN | ai-safety, preprint, q-biogn | E5 / R4 (96%) | - |
| ELISA: An Interpretable Hybrid Generative AI Agent for Expression-Grounded Discovery in Single-Cell Genomics Omar Coser Published: 2026-03-12Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-03-12 | q-bio.GN | ai-safety, preprint, q-biogn | E5 / R3 (94%) | - |
| How Private Are DNA Embeddings? Inverting Foundation Model Representations of Genomic Sequences Jules Kreuer, Nico Pfeifer, Sofiane Ouaari Published: 2026-03-06Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-03-06 | q-bio.GN | ai-safety, preprint, q-biogn | E5 / R3 (94%) | - |
| Multi-Dimensional Spectral Geometry of Biological Knowledge in Single-Cell Transformer Representations Ihor Kendiukhov Published: 2026-02-24Area: q-bio.GNCitations: 15 Tags: ai-safety, preprint, q-biogn | 2026-02-24 | q-bio.GN | ai-safety, preprint, q-biogn | E11 / R8 (91%) | 15 |
| GeneZip: Region-Aware Compression for Long Context DNA Modeling Hongyu Guo, Jianan Zhao, Jian Tang, Xinyu Yuan Published: 2026-02-19Area: q-bio.GNCitations: - Tags: ai-safety, preprint, q-biogn | 2026-02-19 | q-bio.GN | ai-safety, preprint, q-biogn | E14 / R8 (88%) | - |
| Systematic Evaluation of Single-Cell Foundation Model Interpretability Reveals Attention Captures Co-Expression Rather Than Unique Regulatory Signal Ihor Kendiukhov Published: 2026-02-19Area: q-bio.GNCitations: 153 Tags: ai-safety, interpretability, preprint, q-biogn, safety-evaluation | 2026-02-19 | q-bio.GN | ai-safety, interpretability, preprint, q-biogn, safety-evaluation | E10 / R8 (91%) | 153 |